awesome-alternative-splicing
github.com/hussainather/awesome-alternative-splicing ↗Alternative splicing resource
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Add the Context Awesome MCP server to Claude, Cursor, or any MCP client, then ask:
"Show me software resources from awesome-alternative-splicing"
Installation instructions →What's inside
Software
- ALEXA-Seq
alternative expression analysis by massively parallel sequencing.
- AltAnalyze
analyze alternative splicing from single-cell and RNA-Seq data.
- Cufflinks
assemble and quantify transcripts.
- DEXSeq
identify differential exon usage.
- flotilla
reproduce machine learning analysis of gene expression and alternative splicing data.
- GMAP and GSNAP
detect complex variants and splicing in short reads, SNP-tolerant.
Databases
- ASG
Alternative Splicing Gallery for human genes.
- ASIP
Alternative Splicing in Plants.
- ASPicDB
Alternative Splicing PredICtion DataBase.
- ENSEMBL
Human and mouse genome annotations.
- FAST DB/Easana
Friendly Alternative Splicing and Transcripts Database.
- H-DBAS
Human-transcriptome DataBase for Alternative Splicing.
Showing a sample of 36 resources. View the full list on GitHub →