awesome-rm-omics
github.com/smdabdoub/awesome-rm-omics ↗List of software packages for repeated measures analysis in -omics data
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59
Curated Resources
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2 hours ago
Last Refreshed
Software packages and methodsReviews / Evaluations / OpinionLongitudinal/Repeated Measures Application Papers
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Software packages and methods
- A decision analysis model for KEGG pathway analysisPathway Analysis
Du -
- (a)GLMM-MiRKATLinear/Mixed Modeling
Koh -
- A Linear Mixed Model Spline Framework for Analysing Time Course ‘Omics’ DataSpline Modeling
Straube -
- A mixed-model approach for estimating drivers of microbiota community composition and differential taxonomic abundanceLinear/Mixed Modeling
- A Novel Dynamic Impact Approach (DIA) for Functional Analysis of Time-Course Omics StudiesPathway Analysis
Bionaz -
- A phylogenetic model for the recruitment of species into microbial communities and application to studies of the human microbiomePhylogeny-based
Darcy -
Reviews / Evaluations / Opinion
- A review on longitudinal data analysis with random forestMachine Learning/Artificial Neural Networks (Deep Learning) Methods
Hu & Szymczak -
- Causal discovery for the microbiome
Corander -
- Causal Inference in Microbiome Medicine: Principles and Applications
Lv -
- Dynamic modeling and network approaches for omics time course data
Liang -
- How longitudinal data can contribute to our understanding of host genetic effects on the gut microbiome
Grieneisen -
- Methodological Considerations in Longitudinal Analyses of Microbiome Data: A Comprehensive Review
Lyu -
Longitudinal/Repeated Measures Application Papers
Showing a sample of 59 resources. View the full list on GitHub →